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Intron Name: Anas_platyrhynchos_platyrhynchos_1_179058514_179059653_F

Intron Information:

Intron Rank:

140974

Intron Class:

major

Intron Phase:

Intron Coordinates:

179058514 - 179059653

Intron Length:

1140

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTGAA

5'SS Class:

strong_major

3'SS Sequence:

ATTTCACCTAAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAC

U12 Branch Point Sequence:

TTTCACCTAAAG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

73.7

32.5

Major BPS

81.3

0.78

0.8

83.4

26.1

Major PPT

66.8

0.38

1.1

65.4

34.9

Minor 5ss

25.2

-2.9

3.2

30.3

43.5

Minor BPS

49.4

-0.1

64.68

42.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025918

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046826

179057462 - 179060156

2695