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Intron Name: Anas_platyrhynchos_platyrhynchos_1_179232579_179236338_R

Intron Information:

Intron Rank:

148104

Intron Class:

major

Intron Phase:

Intron Coordinates:

179232579 - 179236338

Intron Length:

3760

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATC|GTGAGTTGA

5'SS Class:

major

3'SS Sequence:

TTTCTTCTTGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATGTTTTTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.6

0.39

1.3

63.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

88.6

0.87

0.6

85.2

22.3

Minor 5ss

35.6

-1.6

2.8

40.7

40.1

Minor BPS

59.2

0.37

1.5

73.08

38.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026978

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027232

179232285 - 179237275

4991