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Intron Name: Anas_platyrhynchos_platyrhynchos_1_179308243_179308756_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

179308243 - 179308756

Intron Length:

514

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGGCAA

5'SS Class:

major

3'SS Sequence:

GTTATTCGTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAA

U12 Branch Point Sequence:

ATTATTTGAATT

Flanking Amino Acid:

SATTAISDLKVQVQQELVYL

Intron Amino Acid Position:

1525

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

68.6

Major BPS

78.4

0.71

0.9

69.4

37.7

Major PPT

72.1

0.5

70.3

41.2

Minor 5ss

31.8

-2.1

3.3

38.6

40.8

Minor BPS

59.9

0.39

1.4

75.45

35.3

Associated Gene:

Gene:

LMO7

Ensembl Gene ID:

ENSAPLG00000005073

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020897

179308196 - 179434860

126665

ENSAPLT00000020174

179308196 - 179434860

126665

ENSAPLT00000019090

179308196 - 179434860

126665

ENSAPLT00000044917

179308196 - 179434860

126665

ENSAPLT00000005308

179306332 - 179348932

42601

ENSAPLT00000037923

179308196 - 179434860

126665