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Intron Name: Anas_platyrhynchos_platyrhynchos_1_179323428_179325107_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

179323428 - 179325107

Intron Length:

1680

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAATGGGT

5'SS Class:

major

3'SS Sequence:

GCAAATCCCACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCAAAT

U12 Branch Point Sequence:

TTGCCTTCTACT

Flanking Amino Acid:

YSYNSWVYLCGGPEPALPDL

Intron Amino Acid Position:

1058

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.3

0.5

1.1

62.4

Major BPS

62.1

0.3

1.2

67.3

37.8

Major PPT

0.2

38.8

Minor 5ss

31.2

-2.2

3.6

44.2

45.5

Minor BPS

51.6

0.13

1.9

73.8

42.9

Associated Gene:

Gene:

LMO7

Ensembl Gene ID:

ENSAPLG00000005073

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042547

179306343 - 179349632

43290

ENSAPLT00000005308

179306332 - 179348932

42601