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Intron Name: Anas_platyrhynchos_platyrhynchos_1_179327291_179328697_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

179327291 - 179328697

Intron Length:

1407

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

CACATACCAAAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCTTGAT

U12 Branch Point Sequence:

TCTACGTTAATT

Flanking Amino Acid:

VMDVRRYGKNDWGKDQPSLP

Intron Amino Acid Position:

689

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

76.6

34.9

Major BPS

83.8

0.84

73.6

41.8

Major PPT

48.9

-0

1.1

46.2

34.2

Minor 5ss

36.6

-1.5

2.9

46.4

44.2

Minor BPS

61.7

0.45

2.1

80.31

42.1

Associated Gene:

Gene:

LMO7

Ensembl Gene ID:

ENSAPLG00000005073

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020897

179308196 - 179434860

126665

ENSAPLT00000020174

179308196 - 179434860

126665