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Intron Name: Anas_platyrhynchos_platyrhynchos_1_179487700_179488562_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

179487700 - 179488562

Intron Length:

863

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGCACA

5'SS Class:

strong_major

3'SS Sequence:

GATATCCCTACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTGAT

U12 Branch Point Sequence:

GTTCTCTGGATA

Flanking Amino Acid:

KITSAVSFLFSTAARNNLST

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.3

0.95

0.8

80.7

33.8

Major BPS

74.7

0.61

0.9

63.4

35.6

Major PPT

71.1

0.48

0.9

62.4

39.4

Minor 5ss

39.7

-1.2

2.8

49.8

46.2

Minor BPS

53.9

0.12

1.4

64.9

34.9

Associated Gene:

Gene:

COMMD6

Ensembl Gene ID:

ENSAPLG00000005004

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005170

179486460 - 179491061

4602