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Intron Name: Anas_platyrhynchos_platyrhynchos_1_179489891_179490918_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

179489891 - 179490918

Intron Length:

1028

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCTGTAAT

5'SS Class:

major

3'SS Sequence:

TCTTCCTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTTAT

U12 Branch Point Sequence:

CTTATCTTAACT

Flanking Amino Acid:

TFEMTIPQFKNFVRQFKEMA

Intron Amino Acid Position:

192

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.8

0.61

1.3

79.7

35.4

Major BPS

74.8

0.62

0.9

63.7

35.1

Major PPT

90.2

0.9

0.6

88.3

21.4

Minor 5ss

38.9

-1.2

2.6

51.1

45.4

Minor BPS

78.5

0.97

1.2

88.22

36.9

Associated Gene:

Gene:

COMMD6

Ensembl Gene ID:

ENSAPLG00000005004

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005170

179486460 - 179491061

4602