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Intron Name: Anas_platyrhynchos_platyrhynchos_1_179529149_179564087_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

179529149 - 179564087

Intron Length:

34939

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATATTTC

5'SS Class:

strong_major

3'SS Sequence:

ATCTGTCCCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

GATATTTTAATC

Flanking Amino Acid:

MKLKAEVPDVISSIRQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

77.3

31.9

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

69.2

0.43

0.8

66.6

Minor 5ss

50.8

0.03

2.5

69.7

41.2

Minor BPS

62.1

0.36

1.2

64.49

34.9

Associated Gene:

Gene:

TBC1D4

Ensembl Gene ID:

ENSAPLG00000004362

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004555

179529131 - 179608472

79342