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Intron Name: Anas_platyrhynchos_platyrhynchos_1_179569881_179572721_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

179569881 - 179572721

Intron Length:

2841

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGTATT

5'SS Class:

strong_major

3'SS Sequence:

CCTTCTCCTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

TTTTGTTTATAC

Flanking Amino Acid:

YVFQCASESLVDEVMLTLKQ

Intron Amino Acid Position:

273

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.8

88.7

25.1

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

79.5

0.66

0.7

77.5

24.5

Minor 5ss

36.4

-1.5

48.3

41.8

Minor BPS

51.9

0.04

2.1

71.15

40.4

Associated Gene:

Gene:

TBC1D4

Ensembl Gene ID:

ENSAPLG00000004362

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004555

179529131 - 179608472

79342