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Intron Name: Anas_platyrhynchos_platyrhynchos_1_179572855_179574816_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

179572855 - 179574816

Intron Length:

1962

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACAGCT

5'SS Class:

major

3'SS Sequence:

TTTCTCTTCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTATTTTTATTT

Flanking Amino Acid:

SLHKLCERIEGLYPPRAKLV

Intron Amino Acid Position:

317

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.66

1.1

72.5

37.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

89.1

0.88

0.6

88.3

21.3

Minor 5ss

38.6

-1.3

3.4

57.4

46.8

Minor BPS

64.7

0.54

1.5

79.8

36.8

Associated Gene:

Gene:

TBC1D4

Ensembl Gene ID:

ENSAPLG00000004362

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004555

179529131 - 179608472

79342