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Intron Name: Anas_platyrhynchos_platyrhynchos_1_179592953_179596237_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

179592953 - 179596237

Intron Length:

3285

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGCTAT

5'SS Class:

major

3'SS Sequence:

TTTTGTGCTGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTTAT

U12 Branch Point Sequence:

TCTTCCTTTATG

Flanking Amino Acid:

RMEKENQKLEASRDELQSRK

Intron Amino Acid Position:

649

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

1.1

76.1

35.9

Major BPS

71.5

0.54

1.1

63.3

42.8

Major PPT

78.7

0.64

0.9

73.9

36.8

Minor 5ss

41.9

-0.9

2.9

56.2

Minor BPS

68.2

0.43

1.7

71.2

42.2

Associated Gene:

Gene:

TBC1D4

Ensembl Gene ID:

ENSAPLG00000004362

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004555

179529131 - 179608472

79342