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Intron Name: Anas_platyrhynchos_platyrhynchos_1_179596397_179596953_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

179596397 - 179596953

Intron Length:

557

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTTACA

5'SS Class:

major

3'SS Sequence:

GACTGAACTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAC

U12 Branch Point Sequence:

TGTGACTGAACT

Flanking Amino Acid:

MEDIHGTLKEGVPKSRRGEI

Intron Amino Acid Position:

702

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

75.2

Major BPS

71.3

0.53

1.2

63.1

44.5

Major PPT

61.5

0.26

52.1

41.5

Minor 5ss

42.2

-0.9

2.4

52.6

43.9

Minor BPS

59.8

0.39

1.8

79.08

42.4

Associated Gene:

Gene:

TBC1D4

Ensembl Gene ID:

ENSAPLG00000004362

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004555

179529131 - 179608472

79342