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Intron Name: Anas_platyrhynchos_platyrhynchos_1_179773954_179774122_F

Intron Information:

Intron Rank:

146096

Intron Class:

major

Intron Phase:

Intron Coordinates:

179773954 - 179774122

Intron Length:

169

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTAATTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATTTTTTTAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.8

83.2

28.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

88.6

0.87

0.8

86.6

31.3

Minor 5ss

36.2

-1.6

2.7

42.6

38.5

Minor BPS

80.4

1.03

0.9

89.47

28.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028711

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017976

179762510 - 179774268

11759