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Intron Name: Anas_platyrhynchos_platyrhynchos_1_179856935_179859950_R

Intron Information:

Intron Rank:

139296

Intron Class:

major

Intron Phase:

Intron Coordinates:

179856935 - 179859950

Intron Length:

3016

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTAGT

5'SS Class:

strong_major

3'SS Sequence:

GATTTTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTGAT

U12 Branch Point Sequence:

TCATTCAAAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.9

84.6

33.2

Major BPS

79.8

0.74

0.9

69.4

37.7

Major PPT

84.5

0.78

0.8

81.5

35.8

Minor 5ss

39.2

-1.2

2.8

51.8

Minor BPS

49.1

0.02

1.9

68.84

42.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022414

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026158

179851942 - 179869200

17259

ENSAPLT00000048287

179855287 - 179869200

13914