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Intron Name: Anas_platyrhynchos_platyrhynchos_1_179860258_179862689_R

Intron Information:

Intron Rank:

139297

Intron Class:

major

Intron Phase:

Intron Coordinates:

179860258 - 179862689

Intron Length:

2432

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

ACT|GCAAGTACA

5'SS Class:

major

3'SS Sequence:

CCTTTTTTCCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATCAT

U12 Branch Point Sequence:

CTCTAGCTAACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.5

0.39

1.5

73.4

37.1

Major BPS

79.4

0.73

80.1

Major PPT

86.2

0.81

0.7

79.6

32.4

Minor 5ss

28.6

-2.5

3.8

44.7

42.7

Minor BPS

44.3

-0.4

2.4

59.84

45.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022414

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048287

179855287 - 179869200

13914

ENSAPLT00000026158

179851942 - 179869200

17259