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Intron Name: Anas_platyrhynchos_platyrhynchos_1_1801392_1806704_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1801392 - 1806704

Intron Length:

5313

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTGTA

5'SS Class:

strong_major

3'SS Sequence:

GTTTTCTTAGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCCCAA

U12 Branch Point Sequence:

GTTTTCTTAGCA

Flanking Amino Acid:

YLHCVNHAKQSMLGRGG*

Intron Amino Acid Position:

227

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.78

0.9

77.5

32.8

Major BPS

45.3

-0.2

1.2

35.2

Major PPT

81.7

0.71

0.9

78.2

34.9

Minor 5ss

29.4

-2.4

3.4

39.4

46.5

Minor BPS

71.7

0.68

1.5

79.92

35.9

Associated Gene:

Gene:

CHCHD3

Ensembl Gene ID:

ENSAPLG00000005618

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017919

1657693 - 1806853

149161