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Intron Name: Anas_platyrhynchos_platyrhynchos_1_180159826_180172699_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

180159826 - 180172699

Intron Length:

12874

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTATC

5'SS Class:

major

3'SS Sequence:

GTTCAATTTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAAAAT

U12 Branch Point Sequence:

AAATTCCTAATT

Flanking Amino Acid:

TALSIARAVQEESMWGCARS

Intron Amino Acid Position:

235

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

35.3

Major BPS

70.6

0.51

1.1

75.9

34.4

Major PPT

76.4

0.59

66.2

Minor 5ss

41.6

-0.9

2.8

51.4

39.2

Minor BPS

59.2

0.37

1.6

73.13

37.4

Associated Gene:

Gene:

KLF12

Ensembl Gene ID:

ENSAPLG00000030690

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020709

180117082 - 180229597

112516

ENSAPLT00000043416

180059987 - 180230357

170371

ENSAPLT00000029113

180059987 - 180230357

170371