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Intron Name: Anas_platyrhynchos_platyrhynchos_1_180258913_180261497_F

Intron Information:

Intron Rank:

137075

Intron Class:

major

Intron Phase:

Intron Coordinates:

180258913 - 180261497

Intron Length:

2585

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAATC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTGAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAA

U12 Branch Point Sequence:

TTTATTTGAATC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.6

1.03

0.7

25.3

Major BPS

78.4

0.71

0.9

69.4

37.7

Major PPT

77.8

0.63

1.7

92.3

26.6

Minor 5ss

-1.3

3.1

51.9

44.9

Minor BPS

61.2

0.33

1.4

71.31

33.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023821

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018071

180257841 - 180262096

4256