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Intron Name: Anas_platyrhynchos_platyrhynchos_1_180309278_180413089_F

Intron Information:

Intron Rank:

133010

Intron Class:

major

Intron Phase:

Intron Coordinates:

180309278 - 180413089

Intron Length:

103812

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAGGCCAA

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTCAC

U12 Branch Point Sequence:

AGCTTGTTCACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.8

0.44

1.2

44.9

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

100

1.12

0.4

100

Minor 5ss

35.3

-1.7

3.3

38.1

46.9

Minor BPS

46.3

-0.2

2.4

66.06

44.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021536

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018471

180309161 - 180414204

105044