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Intron Name: Anas_platyrhynchos_platyrhynchos_1_180392890_180413089_F

Intron Information:

Intron Rank:

133013

Intron Class:

major

Intron Phase:

Intron Coordinates:

180392890 - 180413089

Intron Length:

20200

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTCAC

U12 Branch Point Sequence:

AGCTTGTTCACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.01

0.7

86.6

22.3

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

100

1.12

0.4

100

Minor 5ss

28.9

-2.4

3.2

39.6

46.4

Minor BPS

46.3

-0.2

2.4

66.06

44.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021536

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032050

180392750 - 180414598

21849