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Intron Name: Anas_platyrhynchos_platyrhynchos_1_180467083_180468431_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

180467083 - 180468431

Intron Length:

1349

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGGAA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAGTCAT

U12 Branch Point Sequence:

TTATCCTACATT

Flanking Amino Acid:

ATLPAEEMVQTRCEMEKYLA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

69.3

37.4

Major BPS

68.2

0.45

1.1

69.4

37.7

Major PPT

95.4

1.02

0.5

91.9

18.9

Minor 5ss

27.1

-2.6

3.7

36.6

47.9

Minor BPS

57.7

0.32

2.1

80.42

41.9

Associated Gene:

Gene:

KLF5

Ensembl Gene ID:

ENSAPLG00000004321

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004437

180450187 - 180468662

18476