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Intron Name: Anas_platyrhynchos_platyrhynchos_1_180488503_180490423_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

180488503 - 180490423

Intron Length:

1921

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTAAGTACT

5'SS Class:

major

3'SS Sequence:

TTATTTTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TTATTTTTTACA

Flanking Amino Acid:

NIFTPKPTLFTNTEAPVWYK

Intron Amino Acid Position:

744

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.2

0.67

79.2

33.9

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

0.94

0.7

87.7

29.5

Minor 5ss

40.9

-1

2.8

58.9

39.3

Minor BPS

65.1

0.47

1.6

75.19

35.9

Associated Gene:

Gene:

PIBF1

Ensembl Gene ID:

ENSAPLG00000004063

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032272

180488179 - 180609070

120892

ENSAPLT00000004197

180488179 - 180609070

120892