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Intron Name: Anas_platyrhynchos_platyrhynchos_1_180490604_180510237_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

180490604 - 180510237

Intron Length:

19634

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATCTTT

5'SS Class:

strong_major

3'SS Sequence:

TTGTGGTTTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAC

U12 Branch Point Sequence:

TACTGAATAACT

Flanking Amino Acid:

DLEKLLTHREELAVMKQILI

Intron Amino Acid Position:

684

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

80.7

34.7

Major BPS

77.8

0.69

0.9

69.4

37.3

Major PPT

0.56

68.8

42.1

Minor 5ss

49.9

-0

2.8

73.7

42.8

Minor BPS

47.6

-0.1

2.2

71.46

44.8

Associated Gene:

Gene:

PIBF1

Ensembl Gene ID:

ENSAPLG00000004063

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032272

180488179 - 180609070

120892

ENSAPLT00000004197

180488179 - 180609070

120892