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Intron Name: Anas_platyrhynchos_platyrhynchos_1_180519081_180523174_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

180519081 - 180523174

Intron Length:

4094

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAATTAC

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTTGTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TGAATTTTAAAA

Flanking Amino Acid:

KEQVTQISQELDRANSLLSQ

Intron Amino Acid Position:

612

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.88

0.9

80.8

Major BPS

90.4

0.7

90.2

19.3

Major PPT

82.4

0.73

0.9

84.8

Minor 5ss

39.8

-1.1

2.9

45.2

Minor BPS

56.5

0.2

1.4

62.79

36.8

Associated Gene:

Gene:

PIBF1

Ensembl Gene ID:

ENSAPLG00000004063

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032272

180488179 - 180609070

120892

ENSAPLT00000017310

180510085 - 180609867

99783

ENSAPLT00000004197

180488179 - 180609070

120892