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Intron Name: Anas_platyrhynchos_platyrhynchos_1_180523278_180527635_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

180523278 - 180527635

Intron Length:

4358

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATAGG

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTGGCACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAAAAAA

U12 Branch Point Sequence:

AACAACTTGAGT

Flanking Amino Acid:

PTTAKRRLKQSVHLARRLLQ

Intron Amino Acid Position:

577

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

0.9

75.1

41.1

Major BPS

47.9

-0.1

0.9

51.7

28.4

Major PPT

72.8

0.51

68.1

42.3

Minor 5ss

34.5

-1.8

2.8

42.5

44.3

Minor BPS

46.8

-0.1

1.9

60.09

43.1

Associated Gene:

Gene:

PIBF1

Ensembl Gene ID:

ENSAPLG00000004063

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032272

180488179 - 180609070

120892

ENSAPLT00000017310

180510085 - 180609867

99783

ENSAPLT00000004197

180488179 - 180609070

120892