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Intron Name: Anas_platyrhynchos_platyrhynchos_1_180584776_180588811_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

180584776 - 180588811

Intron Length:

4036

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAACTTT

5'SS Class:

strong_major

3'SS Sequence:

ATGCCTTTTATAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTCTTTTTAATG

Flanking Amino Acid:

AKERNDLSKELTTIQQSLNL

Intron Amino Acid Position:

306

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

81.2

33.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

74.9

0.56

0.9

69.1

36.4

Minor 5ss

49.1

-0.1

73.2

43.7

Minor BPS

71.1

0.52

1.3

69.97

38.4

Associated Gene:

Gene:

PIBF1

Ensembl Gene ID:

ENSAPLG00000004063

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004197

180488179 - 180609070

120892

ENSAPLT00000032272

180488179 - 180609070

120892

ENSAPLT00000017310

180510085 - 180609867

99783