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Intron Name: Anas_platyrhynchos_platyrhynchos_1_180599665_180605821_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

180599665 - 180605821

Intron Length:

6157

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTGAGTATT

5'SS Class:

major

3'SS Sequence:

TTTGTTCTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

AAATTTTGAATC

Flanking Amino Acid:

DQLSIPEYVSVRFYEVVHSL

Intron Amino Acid Position:

185

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.58

80.3

34.1

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

86.6

0.82

0.7

85.5

29.2

Minor 5ss

39.1

-1.2

3.1

61.3

Minor BPS

54.6

0.12

1.3

59.29

33.2

Associated Gene:

Gene:

PIBF1

Ensembl Gene ID:

ENSAPLG00000004063

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004197

180488179 - 180609070

120892

ENSAPLT00000032272

180488179 - 180609070

120892

ENSAPLT00000017310

180510085 - 180609867

99783