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Intron Name: Anas_platyrhynchos_platyrhynchos_1_180606021_180607824_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

180606021 - 180607824

Intron Length:

1804

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTATGACAA

5'SS Class:

strong_major

3'SS Sequence:

ATCAATCTTAAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCGAAT

U12 Branch Point Sequence:

TCAATCTTAAAG

Flanking Amino Acid:

SQLALQQEDARKHQALMKQE

Intron Amino Acid Position:

118

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

69.6

36.5

Major BPS

69.6

0.49

1.4

77.9

34.9

Major PPT

61.9

0.27

1.1

39.9

Minor 5ss

37.4

-1.4

47.2

48.2

Minor BPS

57.1

0.08

1.6

57.95

43.3

Associated Gene:

Gene:

PIBF1

Ensembl Gene ID:

ENSAPLG00000004063

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004197

180488179 - 180609070

120892

ENSAPLT00000032272

180488179 - 180609070

120892

ENSAPLT00000017310

180510085 - 180609867

99783