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Intron Name: Anas_platyrhynchos_platyrhynchos_1_180612768_180615152_F


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
180612768 - 180615152

Intron Length:
2385

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GGG|GTATGTCTT

5'SS Class:
major

3'SS Sequence:
TTTCCCCTTAAAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTCTT

U12 Branch Point Sequence:
TTCCCCTTAAAG

Flanking Amino Acid:
DRLACVSDEGKEIESGKIIF

Intron Amino Acid Position:
220

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79.5
0.69
1
74.4
41.9

Major BPS
39.5
-0.6
4.3
85.7
34.9

Major PPT
75.1
0.57
1
75.1
27.5

Minor 5ss
45.8
-0.4
2.8
59.1
45.4

Minor BPS
69.3
0.47
1.5
70.4
42.3

Associated Gene:

Gene:
DIS3

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

180609888 - 180639606
29719