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Intron Name: Anas_platyrhynchos_platyrhynchos_1_180648037_180649282_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

180648037 - 180649282

Intron Length:

1246

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAAGTAGC

5'SS Class:

major

3'SS Sequence:

TTTGTTATTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

TTTTTTGTTATT

Flanking Amino Acid:

CRSPLETSSSGQFSSSPIQG

Intron Amino Acid Position:

226

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

70.3

40.5

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

75.2

0.57

1.1

76.4

36.6

Minor 5ss

38.3

-1.3

2.8

51.5

Minor BPS

49.6

0.05

2.2

78.47

38.5

Associated Gene:

Gene:

BORA

Ensembl Gene ID:

ENSAPLG00000012807

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013360

180642939 - 180658441

15503

ENSAPLT00000010538

180642939 - 180658441

15503