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Intron Name: Anas_platyrhynchos_platyrhynchos_1_180651703_180652853_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

180651703 - 180652853

Intron Length:

1151

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

ATCTGTTTCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

ACATACTTAAAT

Flanking Amino Acid:

KQVSQFNSTKSIDLNSISPI

Intron Amino Acid Position:

131

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

78.2

36.4

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

77.9

0.63

0.9

71.9

37.5

Minor 5ss

38.5

-1.3

2.8

50.4

39.2

Minor BPS

62.1

0.46

1.6

Associated Gene:

Gene:

BORA

Ensembl Gene ID:

ENSAPLG00000012807

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013360

180642939 - 180658441

15503

ENSAPLT00000010538

180642939 - 180658441

15503