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Intron Name: Anas_platyrhynchos_platyrhynchos_1_180657073_180658270_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

180657073 - 180658270

Intron Length:

1198

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTAAGATCT

5'SS Class:

major

3'SS Sequence:

TTTTTTATTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTATTT

Flanking Amino Acid:

SVFKSTKSSSTPGKFRWSID

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.1

0.5

1.1

68.5

37.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

90.1

0.9

0.7

90.1

24.5

Minor 5ss

43.5

-0.7

3.1

67.8

42.5

Minor BPS

70.5

0.72

1.5

86.8

33.5

Associated Gene:

Gene:

BORA

Ensembl Gene ID:

ENSAPLG00000012807

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010538

180642939 - 180658441

15503

ENSAPLT00000013360

180642939 - 180658441

15503