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Intron Name: Anas_platyrhynchos_platyrhynchos_1_181071909_181220644_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

181071909 - 181220644

Intron Length:

148736

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACAGCC

5'SS Class:

major

3'SS Sequence:

TTGTTTGTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAA

U12 Branch Point Sequence:

AACAGCTTAATT

Flanking Amino Acid:

ETLYNDCTNASSRPGRPPKR

Intron Amino Acid Position:

249

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.5

0.63

1.1

66.9

37.4

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

86.1

0.81

0.9

84.6

Minor 5ss

37.2

-1.4

3.4

51.6

45.1

Minor BPS

0.23

1.8

68.17

42.8

Associated Gene:

Gene:

DACH1

Ensembl Gene ID:

ENSAPLG00000012935

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022006

181071163 - 181423910

352748

ENSAPLT00000021995

181071163 - 181432814

361652

ENSAPLT00000013480

181071163 - 181432814

361652

ENSAPLT00000013476

181071163 - 181401438

330276

ENSAPLT00000035078

181071163 - 181506302

435140