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Intron Name: Anas_platyrhynchos_platyrhynchos_1_181220761_181256481_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

181220761 - 181256481

Intron Length:

35721

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGATTG

5'SS Class:

strong_major

3'SS Sequence:

TCATACTTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

TGTATATTAAAT

Flanking Amino Acid:

LMSPGIIPPTGLTAAAAAAA

Intron Amino Acid Position:

288

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

72.5

39.9

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

79.4

0.66

0.9

73.2

36.6

Minor 5ss

40.2

-1.1

3.4

55.2

Minor BPS

56.9

0.3

1.7

76.18

39.5

Associated Gene:

Gene:

DACH1

Ensembl Gene ID:

ENSAPLG00000012935

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035078

181071163 - 181506302

435140

ENSAPLT00000022006

181071163 - 181423910

352748

ENSAPLT00000013480

181071163 - 181432814

361652

ENSAPLT00000013476

181071163 - 181401438

330276