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Intron Name: Anas_platyrhynchos_platyrhynchos_1_181330237_181382311_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

181330237 - 181382311

Intron Length:

52075

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATATGA

5'SS Class:

strong_major

3'SS Sequence:

CAATCACATACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCAAT

U12 Branch Point Sequence:

TTTGTTTCAATC

Flanking Amino Acid:

HESKRIHIEKDETPLSTPTA

Intron Amino Acid Position:

543

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

70.6

36.1

Major BPS

76.9

0.67

1.2

31.9

Major PPT

63.3

0.3

55.1

Minor 5ss

37.4

-1.4

48.4

47.1

Minor BPS

57.7

0.22

1.6

69.41

36.9

Associated Gene:

Gene:

DACH1

Ensembl Gene ID:

ENSAPLG00000012935

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021995

181071163 - 181432814

361652

ENSAPLT00000013480

181071163 - 181432814

361652

ENSAPLT00000013476

181071163 - 181401438

330276

ENSAPLT00000035078

181071163 - 181506302

435140

ENSAPLT00000022006

181071163 - 181423910

352748