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Intron Name: Anas_platyrhynchos_platyrhynchos_1_181382464_181391881_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

181382464 - 181391881

Intron Length:

9418

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGCCTT

5'SS Class:

strong_major

3'SS Sequence:

TATCTTTGAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAAAAT

U12 Branch Point Sequence:

TATCTTTGAACA

Flanking Amino Acid:

SIETLLTNIQGLLKVAIDNA

Intron Amino Acid Position:

594

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

72.7

44.5

Major BPS

70.6

0.51

1.1

75.9

34.4

Major PPT

72.7

0.51

69.5

40.2

Minor 5ss

42.4

-0.8

3.5

64.4

Minor BPS

61.9

0.37

1.4

70.7

34.8

Associated Gene:

Gene:

DACH1

Ensembl Gene ID:

ENSAPLG00000012935

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021995

181071163 - 181432814

361652

ENSAPLT00000013480

181071163 - 181432814

361652

ENSAPLT00000013476

181071163 - 181401438

330276

ENSAPLT00000035078

181071163 - 181506302

435140

ENSAPLT00000022006

181071163 - 181423910

352748