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Intron Name: Anas_platyrhynchos_platyrhynchos_1_181392030_181396520_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

181392030 - 181396520

Intron Length:

4491

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATCTTCA

5'SS Class:

weak_major

3'SS Sequence:

TTCTTCTTCCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTGAT

U12 Branch Point Sequence:

CAGATCTGAATT

Flanking Amino Acid:

KQLAVEQKNRAIIQKRLKKE

Intron Amino Acid Position:

643

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.6

0.58

1.2

70.3

36.5

Major BPS

83.5

0.83

0.8

71.6

36.4

Major PPT

82.7

0.74

0.7

76.9

31.8

Minor 5ss

57.5

0.25

1.9

68.3

42.4

Minor BPS

50.8

0.1

1.5

62.19

42.1

Associated Gene:

Gene:

DACH1

Ensembl Gene ID:

ENSAPLG00000012935

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021995

181071163 - 181432814

361652

ENSAPLT00000013480

181071163 - 181432814

361652

ENSAPLT00000013476

181071163 - 181401438

330276

ENSAPLT00000035078

181071163 - 181506302

435140

ENSAPLT00000022006

181071163 - 181423910

352748