Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_181397221_181432776_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

181397221 - 181432776

Intron Length:

35556

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGAATT

5'SS Class:

strong_major

3'SS Sequence:

TTTCATATTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTTCATATTC

Flanking Amino Acid:

GRTDAERTIQDGRLYLKTTV

Intron Amino Acid Position:

714

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

84.6

33.3

Major BPS

100

1.24

0.5

100

Major PPT

78.6

0.64

0.8

70.8

39.4

Minor 5ss

-1.4

3.4

57.1

47.2

Minor BPS

57.9

0.23

1.8

74.69

36.2

Associated Gene:

Gene:

DACH1

Ensembl Gene ID:

ENSAPLG00000012935

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021995

181071163 - 181432814

361652

ENSAPLT00000013480

181071163 - 181432814

361652