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Intron Name: Anas_platyrhynchos_platyrhynchos_1_182288281_182328985_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

182288281 - 182328985

Intron Length:

40705

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGGAAG

5'SS Class:

strong_major

3'SS Sequence:

TTCCTCTTCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTGAA

U12 Branch Point Sequence:

TATTACTGAATC

Flanking Amino Acid:

LMKVAHNYTMENIMEVIRNQ

Intron Amino Acid Position:

335

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

71.3

40.1

Major BPS

74.4

0.61

0.9

63.6

35.5

Major PPT

85.1

0.79

0.7

83.9

24.1

Minor 5ss

31.8

-2.1

3.1

36.5

41.9

Minor BPS

0.42

1.6

73.98

36.2

Associated Gene:

Gene:

KLHL1

Ensembl Gene ID:

ENSAPLG00000002429

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002455

182185226 - 182414519

229294