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Intron Name: Anas_platyrhynchos_platyrhynchos_1_182514177_182515015_F


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
182514177 - 182515015

Intron Length:
839

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CCG|GTAAATATC

5'SS Class:
major

3'SS Sequence:
TCTTCTCCTGCAG|C

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTAAAAT

U12 Branch Point Sequence:
TCCTACTTAAAA

Flanking Amino Acid:
MAAAADGLGSIAI

Intron Amino Acid Position:
4

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79.8
0.7
1
78.9
35.1

Major BPS
70.6
0.51
1.1
75.9
34.4

Major PPT
86.3
0.82
0.7
81.2
23.9

Minor 5ss
40.1
-1.1
2.9
55.1
42.4

Minor BPS
62.9
0.4
1.7
69.52
42.5

Associated Gene:

Gene:
ENOX1

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

182454925 - 182647908
192984

182454925 - 182647908
192984