Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_182953935_182954919_F

Intron Information:

Intron Rank:

150751

Intron Class:

major

Intron Phase:

Intron Coordinates:

182953935 - 182954919

Intron Length:

985

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTAATT

5'SS Class:

major

3'SS Sequence:

TCTCCATCACCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

TTGTTATTAAAC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

79.1

34.1

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

70.9

0.47

0.9

63.4

37.2

Minor 5ss

45.6

-0.5

2.9

66.8

44.1

Minor BPS

61.6

0.34

1.7

72.52

38.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000031001

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022080

182953852 - 182956212

2361