Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_183322062_183325391_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

183322062 - 183325391

Intron Length:

3330

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTGAGTACT

5'SS Class:

major

3'SS Sequence:

TATTTTTTGACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

TATTTTTTGACA

Flanking Amino Acid:

HKLRETNDATAQSLASSLST

Intron Amino Acid Position:

619

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

74.6

35.3

Major BPS

73.8

0.59

0.9

26.8

Major PPT

82.7

0.74

80.1

37.1

Minor 5ss

35.1

-1.7

2.8

49.5

40.3

Minor BPS

0.75

1.1

78.4

31.4

Associated Gene:

Gene:

VWA8

Ensembl Gene ID:

ENSAPLG00000010804

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011264

183262239 - 183367298

105060