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Intron Name: Anas_platyrhynchos_platyrhynchos_1_183468794_183470220_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

183468794 - 183470220

Intron Length:

1427

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCTTA

5'SS Class:

strong_major

3'SS Sequence:

TTCTAATTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

ATCTCTCTAACA

Flanking Amino Acid:

LPSPSVTPCKAKLGDTKELE

Intron Amino Acid Position:

111

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.5

0.98

0.8

84.1

30.2

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

83.2

0.75

0.8

77.3

35.6

Minor 5ss

47.4

-0.3

2.8

64.4

Minor BPS

65.1

0.47

1.7

74.29

37.4

Associated Gene:

Gene:

RGCC

Ensembl Gene ID:

ENSAPLG00000009930

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010331

183468723 - 183479992

11270