Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_183527254_183528189_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

183527254 - 183528189

Intron Length:

936

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

TTACTGATAATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TGTTACTTATAT

Flanking Amino Acid:

KLRYDYFLPHGTLEERLQIY

Intron Amino Acid Position:

267

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

83.2

29.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

64.1

0.32

59.5

40.3

Minor 5ss

-0.8

2.8

56.6

41.9

Minor BPS

58.4

0.34

1.9

79.55

41.7

Associated Gene:

Gene:

NAA16

Ensembl Gene ID:

ENSAPLG00000009514

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011218

183502808 - 183548744

45937