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Intron Name: Anas_platyrhynchos_platyrhynchos_1_183528209_183529348_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

183528209 - 183529348

Intron Length:

1140

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TAT|GCATTGGAA

5'SS Class:

weak_major

3'SS Sequence:

TAGGTGTTCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATAAT

U12 Branch Point Sequence:

GCTACTTTATTT

Flanking Amino Acid:

KSLQPSKLRYDYFLPHGTLE

Intron Amino Acid Position:

261

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.6

0.13

1.4

52.2

42.2

Major BPS

0.75

78.6

Major PPT

65.1

0.34

44.1

Minor 5ss

26.8

-2.7

4.3

40.8

46.1

Minor BPS

55.4

0.25

1.6

68.94

42.6

Associated Gene:

Gene:

NAA16

Ensembl Gene ID:

ENSAPLG00000009514

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011218

183502808 - 183548744

45937