Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_183581146_183582016_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

183581146 - 183582016

Intron Length:

871

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGTTCAT

5'SS Class:

major

3'SS Sequence:

ATTTCTCTTTAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

TGTTTTTTAACT

Flanking Amino Acid:

EDLKRLGIKPDEVGPSSVLS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

1.1

70.7

41.1

Major BPS

87.3

0.93

0.8

36.5

Major PPT

76.5

0.6

80.3

31.4

Minor 5ss

34.6

-1.8

3.3

49.6

46.6

Minor BPS

1.11

92.13

30.1

Associated Gene:

Gene:

WBP4

Ensembl Gene ID:

ENSAPLG00000009035

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009423

183570334 - 183588035

17702