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Intron Name: Anas_platyrhynchos_platyrhynchos_1_183582141_183582237_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
183582141 - 183582237

Intron Length:
97

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTAACTCAA

5'SS Class:
strong_major

3'SS Sequence:
TGTTTTCTTTTAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
AATTTAT

U12 Branch Point Sequence:
CTTAATTTATTC

Flanking Amino Acid:
KENVAKRISEIKKKSLEKAK

Intron Amino Acid Position:
47

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
81.5
0.74
1.1
74.1
38.3

Major BPS
79.9
0.74
0.9
69.7
37.1

Major PPT
86.6
0.82
0.7
85.5
29.2

Minor 5ss
39.1
-1.2
2.9
49.8
46.4

Minor BPS
48.1
-0.1
1.8
59.49
40.2

Associated Gene:

Gene:
WBP4

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

183570334 - 183588035
17702