Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_183615150_183629005_F

Intron Information:

Intron Rank:

148767

Intron Class:

major

Intron Phase:

Intron Coordinates:

183615150 - 183629005

Intron Length:

13856

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAACCTT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCTCCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

TTAATTATAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

75.1

41.1

Major BPS

0.92

0.9

86.2

29.1

Major PPT

86.2

0.81

0.6

22.5

Minor 5ss

43.2

-0.8

3.3

64.9

46.4

Minor BPS

59.6

0.38

1.6

78.22

37.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030082

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035804

183614220 - 183629183

14964