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Intron Name: Anas_platyrhynchos_platyrhynchos_1_183666462_183667098_F


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
183666462 - 183667098

Intron Length:
637

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CTG|GTAACATCT

5'SS Class:
major

3'SS Sequence:
TGACTTTCAACAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TCTTCAC

U12 Branch Point Sequence:
TGTTCTTCACCT

Flanking Amino Acid:
YAHILLQNYADAVADAKKSL

Intron Amino Acid Position:
62

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
70.9
0.49
1.2
67.8
38.1

Major BPS
77.5
0.68
1
79.6
33

Major PPT
70.7
0.47
1
66.1
39.5

Minor 5ss
46.3
-0.4
2.9
63.2
42.2

Minor BPS
60.6
0.41
1.8
80.88
40.9

Associated Gene:

Gene:
SUGT1

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

183663177 - 183689665
26489