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Intron Name: Anas_platyrhynchos_platyrhynchos_1_183727255_183727397_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

183727255 - 183727397

Intron Length:

143

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGTCC

5'SS Class:

strong_major

3'SS Sequence:

CCCCCCACCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTGAC

U12 Branch Point Sequence:

TCTCCTTTGACC

Flanking Amino Acid:

QKRLRGPSGEQGFAAAPSFG

Intron Amino Acid Position:

805

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

76.6

33.4

Major BPS

74.1

0.6

66.7

39.9

Major PPT

63.9

0.31

0.8

53.9

29.3

Minor 5ss

-1.4

3.2

50.9

45.8

Minor BPS

71.5

0.66

1.2

75.04

35.8

Associated Gene:

Gene:

PCDH8

Ensembl Gene ID:

ENSAPLG00000027530

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033093

183725792 - 183729809

4018